Read Spatial ATAC-Seq Example Data
Source:R/core_optimal_K.R
read_example_spatial_mouse_brain_atac_data.RdLoads spatial ATAC-seq data from a GitHub repository, including coordinates, deconvolution, region-level features, and motif score matrices.
Value
A list containing:
- coords
Spatial coordinates matrix.
- regions
Matrix or data frame of spatial regions per spot.
- deconv
Cell type deconvolution matrix.
- motif_scores
Matrix of motif activity scores per region.
Examples
if (FALSE) { # \dontrun{
atac_data <- read_example_spatial_mouse_brain_atac_data()
names(atac_data)
} # }