Package index
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compute_contrast_significance() - Compute Significance for Pairwise Covariate Contrast
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compute_significance() - Compute Significance for a Single Covariate
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hello() - Hello, World!
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read_merfish() - Read MERFISH Example Data from GitHub
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read_spatial_atac() - Read Spatial ATAC-Seq Example Data
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read_spatial_long_read() - Read Spatial Long-Read RNA-Seq Data
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read_visium() - Read Visium Example Data from GitHub
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read_visiumHD() - Read Visium HD Example Data from GitHub
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run_model() - Fit a Spatial GLM with Initialization and Optimization
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run_model_parallel_mac() - Parallelized Spot-GLM Model Fitting (macOS / Linux)
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run_model_parallel_windows() - Parallelized Spot-GLM Model Fitting (Windows)
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spot_binomial - Custom GLM Object: Spot Binomial
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spot_gaussian - Custom GLM Object: Spot Gaussian
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spot_lm() - Fit Spatial Linear Model (Spot-GLM Gaussian)
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spot_negative_binomial - Custom GLM Object: Spot Negative Binomial
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spot_poisson - Custom GLM Object: Spot Poisson