Read Spatial Long-Read RNA-Seq Data — read_spatial_long

Loads spatial long-read RNA-seq data from a GitHub repository. Includes coordinates, region annotations, deconvolution, library sizes, and expression matrices for genes and isoforms.

Usage

read_spatial_long_read()

Value

A list containing:

coords: Matrix of spatial coordinates.
regions: Spatial region annotations.
deconv: Cell type deconvolution matrix.
library_size: Vector of library sizes per spot.
total_gene_expression: Matrix of total gene expression.
isoform_expression: Matrix of isoform-level expression.

Examples

if (FALSE) { # \dontrun{
long_read_data <- read_spatial_long_read()
str(long_read_data)
} # }