Read Spatial ATAC-Seq Example Data

Loads spatial ATAC-seq data from a GitHub repository, including coordinates, deconvolution, region-level features, and motif score matrices.

Usage

read_spatial_atac()

Value

A list containing:

coords

Spatial coordinates matrix.

regions

Matrix or data frame of spatial regions per spot.

deconv

Cell type deconvolution matrix.

motif_scores

Matrix of motif activity scores per region.

Examples

if (FALSE) { # \dontrun{
atac_data <- read_spatial_atac()
names(atac_data)
} # }